751-3606-00L  Molecular Plant Breeding

SemesterFrühjahrssemester 2015
DozierendeB. Studer, C. Grieder, A. Hund, R. Kölliker
Periodizitätjährlich wiederkehrende Veranstaltung

KurzbeschreibungMolecular tools have contributed significantly to improve the process of plant breeding throughout the last decades. The course Molecular Plant Breeding illustrates - on the basis of lectures, exercises and practical examples - the most important molecular breeding tools (QTL, association studies..) and how these tools are applied to plant breeding by means of marker-assisted or genomic selection.
LernzielAt the end of the course Molecular Plant Breeding you will be able to:
- design and statistically analyze genetic experiments for important characteristics such as repeatability, heritability, or least square means
- understand different molecular marker technologies and genotyping methods, and how the generated data can be used for genetic distance measures and multivariate statistics in experimental and natural populations
- use the most important molecular breeding tools such as genetic linkage mapping, QTL analysis, genome-wide association studies and to apply these tools to plant breeding by marker-assisted and genomic selection
- describe different sequencing technologies and strategies for genome sequencing, transcriptome profiling (RNAseq) and genotyping by sequencing
- apply basic bioinformatics tools for sequence data management and comparative genomics (BLAST, simple assemblies, alignments and gene annotations)
InhaltThe course Molecular Plant Breeding is based on complementing lectures, exercises and practical examples. The examples cover a wide range of species and traits and will be taught by four different experts in the field. A detailed program including dates and specific contents will be provided by the end of 2014.
SkriptScripts and slides for each lecture and will be made available through eDoz.
LiteraturFor each lecture, additional literature covering the topic will be provided.
Voraussetzungen / BesonderesThe course will be held at Eschikon Field Station, where 12 computers will be available for exercises with R or - if necessary - other specific software packages. Attendance of the courses Pflanzenzüchtung and Plant Breeding II is recommended; basic understanding of R (as taught in Experimental Design and Applied Statistics in Agroecosystem Science) is advantageous.